IL_5TZS_032

3D structure

PDB id

5TZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Architecture of the yeast small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.1 Å

Loop

Sequence

GGUUGAUGAGUUAAC*GCAGUCUGAC

Length

25 nucleotides

Bulged bases

5TZS|1|2|U|81, 5TZS|1|2|G|87, 5TZS|1|2|U|88, 5TZS|1|2|G|323, 5TZS|1|2|U|324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TZS|1|2|G|78
5TZS|1|2|G|79
5TZS|1|2|U|80
5TZS|1|2|U|81
5TZS|1|2|G|82
5TZS|1|2|A|83
5TZS|1|2|U|84
5TZS|1|2|G|85
5TZS|1|2|A|86
5TZS|1|2|G|87
5TZS|1|2|U|88
5TZS|1|2|U|93
5TZS|1|2|A|94
5TZS|1|2|A|95
5TZS|1|2|C|96
*
5TZS|1|2|G|320
5TZS|1|2|C|321
5TZS|1|2|A|322
5TZS|1|2|G|323
5TZS|1|2|U|324
5TZS|1|2|C|325
5TZS|1|2|U|326
5TZS|1|2|G|327
5TZS|1|2|A|328
5TZS|1|2|C|329

Current chains

Chain 2

U3 snoRNA

Nearby chains

Chain b

Nop58

Chain e

Snu13

Chain q

Repeat protein 2

Chain y

Unassigned protein helices