3D structure

PDB id
5U4I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUGAGGU*AUGGAGC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5U4I|1|A|G|1719
5U4I|1|A|U|1720
5U4I|1|A|G|1721
5U4I|1|A|A|1722
5U4I|1|A|G|1723
5U4I|1|A|G|1724
5U4I|1|A|U|1725
*
5U4I|1|A|A|1735
5U4I|1|A|U|1736
5U4I|1|A|G|1737
5U4I|1|A|G|1738
5U4I|1|A|A|1739
5U4I|1|A|G|1740
5U4I|1|A|C|1741

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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