IL_5U4I_102
3D structure
- PDB id
- 5U4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 5U4I|1|A|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5U4I_102 not in the Motif Atlas
- Homologous match to IL_7RQB_101
- Geometric discrepancy: 0.3372
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
5U4I|1|A|C|2591
5U4I|1|A|G|2592
*
5U4I|1|A|C|2601
5U4I|1|A|A|2602
5U4I|1|A|G|2603
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain v
- Peptide chain release factor 2
- Chain x
- Transfer RNA; tRNA
Coloring options: