IL_5U4I_120
3D structure
- PDB id
- 5U4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 5U4I|1|a|C|48, 5U4I|1|a|A|51
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5U4I_120 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.1484
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5U4I|1|a|C|47
5U4I|1|a|C|48
5U4I|1|a|U|49
5U4I|1|a|A|50
5U4I|1|a|A|51
5U4I|1|a|C|52
*
5U4I|1|a|G|359
5U4I|1|a|G|360
5U4I|1|a|G|361
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: