IL_5UYK_169
3D structure
- PDB id
- 5UYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 5UYK|1|A|C|1400, 5UYK|1|A|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UYK_169 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.2288
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
5UYK|1|A|C|1399
5UYK|1|A|C|1400
5UYK|1|A|G|1401
*
5UYK|1|A|C|1501
5UYK|1|A|A|1502
5UYK|1|A|A|1503
5UYK|1|A|G|1504
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain V
- mRNA
- Chain W
- Transfer RNA; tRNA
Coloring options: