IL_5UYN_039

3D structure

PDB id

5UYN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

5UYN|1|01|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UYN|1|01|C|1043
5UYN|1|01|C|1044
5UYN|1|01|C|1045
5UYN|1|01|A|1046
5UYN|1|01|G|1047
5UYN|1|01|A|1048
5UYN|1|01|C|1049
5UYN|1|01|A|1050
5UYN|1|01|G|1051
5UYN|1|01|C|1052
*
5UYN|1|01|G|1107
5UYN|1|01|U|1108
5UYN|1|01|C|1109
5UYN|1|01|G|1110
5UYN|1|01|A|1111
5UYN|1|01|G|1112

Current chains

Chain 01

23S ribosomal RNA

Nearby chains

Chain 08

50S ribosomal protein L6

Chain 10

50S ribosomal protein L10

Chain 34

50S ribosomal protein L36