IL_5UYQ_047
3D structure
- PDB id
- 5UYQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAAC*GGG
- Length
- 8 nucleotides
- Bulged bases
- 5UYQ|1|01|G|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UYQ_047 not in the Motif Atlas
- Homologous match to IL_5J7L_291
- Geometric discrepancy: 0.1681
- The information below is about IL_5J7L_291
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
5UYQ|1|01|C|1319
5UYQ|1|01|C|1320
5UYQ|1|01|A|1321
5UYQ|1|01|A|1322
5UYQ|1|01|C|1323
*
5UYQ|1|01|G|1331
5UYQ|1|01|G|1332
5UYQ|1|01|G|1333
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L22
- Chain 22
- 50S ribosomal protein L23
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