IL_5UZ4_035
3D structure
- PDB id
- 5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GGUGUAG*CGUAGAGAUC
- Length
- 17 nucleotides
- Bulged bases
- 5UZ4|1|A|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UZ4_035 not in the Motif Atlas
- Geometric match to IL_4V88_508
- Geometric discrepancy: 0.2615
- The information below is about IL_4V88_508
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99095.1
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5UZ4|1|A|G|682
5UZ4|1|A|G|683
5UZ4|1|A|U|684
5UZ4|1|A|G|685
5UZ4|1|A|U|686
5UZ4|1|A|A|687
5UZ4|1|A|G|688
*
5UZ4|1|A|C|699
5UZ4|1|A|G|700
5UZ4|1|A|U|701
5UZ4|1|A|A|702
5UZ4|1|A|G|703
5UZ4|1|A|A|704
5UZ4|1|A|G|705
5UZ4|1|A|A|706
5UZ4|1|A|U|707
5UZ4|1|A|C|708
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain K
- 30S ribosomal protein S11
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