IL_5UZ4_075

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

AGUCUC*GAAGACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|A|655
5UZ4|1|A|G|656
5UZ4|1|A|U|657
5UZ4|1|A|C|658
5UZ4|1|A|U|659
5UZ4|1|A|C|660
*
5UZ4|1|A|G|745
5UZ4|1|A|A|746
5UZ4|1|A|A|747
5UZ4|1|A|G|748
5UZ4|1|A|A|749
5UZ4|1|A|C|750
5UZ4|1|A|U|751

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain F

30S ribosomal protein S6

Chain H

30S ribosomal protein S8

Chain O

30S ribosomal protein S15