IL_5UZ4_093

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GCCCGUCAC*GAAGUCGUAAC

Length

20 nucleotides

Bulged bases

5UZ4|1|A|C|1403, 5UZ4|1|A|A|1492

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|G|1401
5UZ4|1|A|C|1402
5UZ4|1|A|C|1403
5UZ4|1|A|C|1404
5UZ4|1|A|G|1405
5UZ4|1|A|U|1406
5UZ4|1|A|C|1407
5UZ4|1|A|A|1408
5UZ4|1|A|C|1409
*
5UZ4|1|A|G|1491
5UZ4|1|A|A|1492
5UZ4|1|A|A|1493
5UZ4|1|A|G|1494
5UZ4|1|A|U|1495
5UZ4|1|A|C|1496
5UZ4|1|A|G|1497
5UZ4|1|A|U|1498
5UZ4|1|A|A|1499
5UZ4|1|A|A|1500
5UZ4|1|A|C|1501

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain K

30S ribosomal protein S11

Chain L

30S ribosomal protein S12

Chain Z

Small ribosomal subunit biogenesis GTPase RsgA