IL_5UZ4_094

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CAUGGGAGUGGGU*AUUCAUGACUGGG

Length

26 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|C|1412
5UZ4|1|A|A|1413
5UZ4|1|A|U|1414
5UZ4|1|A|G|1415
5UZ4|1|A|G|1416
5UZ4|1|A|G|1417
5UZ4|1|A|A|1418
5UZ4|1|A|G|1419
5UZ4|1|A|U|1420
5UZ4|1|A|G|1421
5UZ4|1|A|G|1422
5UZ4|1|A|G|1423
5UZ4|1|A|U|1424
*
5UZ4|1|A|A|1476
5UZ4|1|A|U|1477
5UZ4|1|A|U|1478
5UZ4|1|A|C|1479
5UZ4|1|A|A|1480
5UZ4|1|A|U|1481
5UZ4|1|A|G|1482
5UZ4|1|A|A|1483
5UZ4|1|A|C|1484
5UZ4|1|A|U|1485
5UZ4|1|A|G|1486
5UZ4|1|A|G|1487
5UZ4|1|A|G|1488

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Z

Small ribosomal subunit biogenesis GTPase RsgA