IL_5V7Q_042
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 5V7Q|1|A|C|1271
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V7Q_042 not in the Motif Atlas
- Homologous match to IL_7RQB_039
- Geometric discrepancy: 0.2234
- The information below is about IL_7RQB_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.3
- Basepair signature
- cWW-cSH-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
5V7Q|1|A|C|1147
5V7Q|1|A|U|1148
5V7Q|1|A|A|1149
5V7Q|1|A|A|1150
5V7Q|1|A|G|1151
5V7Q|1|A|U|1152
5V7Q|1|A|G|1153
*
5V7Q|1|A|C|1269
5V7Q|1|A|U|1270
5V7Q|1|A|C|1271
5V7Q|1|A|A|1272
5V7Q|1|A|A|1273
5V7Q|1|A|G|1274
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
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