IL_5V7Q_047
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 5V7Q|1|A|G|1379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V7Q_047 not in the Motif Atlas
- Homologous match to IL_7A0S_041
- Geometric discrepancy: 0.2401
- The information below is about IL_7A0S_041
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.4
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 21
Unit IDs
5V7Q|1|A|C|1328
5V7Q|1|A|G|1329
5V7Q|1|A|U|1330
*
5V7Q|1|A|A|1378
5V7Q|1|A|G|1379
5V7Q|1|A|U|1380
5V7Q|1|A|G|1381
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
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