IL_5V7Q_121

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGGUUCAC*GUGUAAAG

Length

16 nucleotides

Bulged bases

5V7Q|1|A|G|975, 5V7Q|1|A|A|1059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|U|973
5V7Q|1|A|G|974
5V7Q|1|A|G|975
5V7Q|1|A|U|976
5V7Q|1|A|U|977
5V7Q|1|A|C|978
5V7Q|1|A|A|979
5V7Q|1|A|C|980
*
5V7Q|1|A|G|1055
5V7Q|1|A|U|1056
5V7Q|1|A|G|1057
5V7Q|1|A|U|1058
5V7Q|1|A|A|1059
5V7Q|1|A|A|1060
5V7Q|1|A|A|1061
5V7Q|1|A|G|1062

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L30