IL_5V7Q_123
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 5V7Q|1|A|U|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V7Q_123 not in the Motif Atlas
- Homologous match to IL_4WF9_033
- Geometric discrepancy: 0.2009
- The information below is about IL_4WF9_033
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_16301.3
- Basepair signature
- cWW-cWS-tWH-R-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
5V7Q|1|A|G|993
5V7Q|1|A|C|994
5V7Q|1|A|U|995
5V7Q|1|A|A|996
5V7Q|1|A|C|997
5V7Q|1|A|U|998
*
5V7Q|1|A|A|1038
5V7Q|1|A|A|1039
5V7Q|1|A|A|1040
5V7Q|1|A|C|1041
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: