IL_5V93_156
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUUGC*GGACUC
- Length
- 11 nucleotides
- Bulged bases
- 5V93|1|a|U|1117
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V93_156 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.2499
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5V93|1|a|G|1115
5V93|1|a|U|1116
5V93|1|a|U|1117
5V93|1|a|G|1118
5V93|1|a|C|1119
*
5V93|1|a|G|1136
5V93|1|a|G|1137
5V93|1|a|A|1138
5V93|1|a|C|1139
5V93|1|a|U|1140
5V93|1|a|C|1141
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
Coloring options: