IL_5V93_187
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAAAGACAA*UCAAG
- Length
- 14 nucleotides
- Bulged bases
- 5V93|1|A|A|1175
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V93_187 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2986
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
5V93|1|A|C|1172
5V93|1|A|A|1173
5V93|1|A|A|1174
5V93|1|A|A|1175
5V93|1|A|G|1176
5V93|1|A|A|1177
5V93|1|A|C|1178
5V93|1|A|A|1179
5V93|1|A|A|1180
*
5V93|1|A|U|1237
5V93|1|A|C|1238
5V93|1|A|A|1239
5V93|1|A|A|1240
5V93|1|A|G|1241
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
Coloring options: