IL_5VPO_194
3D structure
- PDB id
- 5VPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site ASL SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.34 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 5VPO|1|XA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5VPO_194 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.091
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
5VPO|1|XA|C|569
5VPO|1|XA|G|570
5VPO|1|XA|U|571
5VPO|1|XA|A|572
5VPO|1|XA|A|573
5VPO|1|XA|A|574
5VPO|1|XA|G|575
*
5VPO|1|XA|C|880
5VPO|1|XA|G|881
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XE
- 30S ribosomal protein S5
- Chain XH
- 30S ribosomal protein S8
- Chain XL
- 30S ribosomal protein S12
- Chain XQ
- 30S ribosomal protein S17
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