IL_5VPP_364
3D structure
- PDB id
- 5VPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site tRNA SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGC*GCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5VPP_364 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.2827
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
5VPP|1|RA|G|1448
5VPP|1|RA|A|1449
5VPP|1|RA|G|1449|||A
5VPP|1|RA|C|1450
*
5VPP|1|RA|G|1461
5VPP|1|RA|C|1462
5VPP|1|RA|C|1463
Current chains
- Chain RA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: