IL_5VPP_369

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CUACCC*GGAUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|XA|C|132
5VPP|1|XA|U|133
5VPP|1|XA|A|134
5VPP|1|XA|C|135
5VPP|1|XA|C|136
5VPP|1|XA|C|137
*
5VPP|1|XA|G|226
5VPP|1|XA|G|227
5VPP|1|XA|A|228
5VPP|1|XA|U|229
5VPP|1|XA|G|230

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16

Chain XT

30S ribosomal protein S20