IL_5VYC_458
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- UUGAAAAAAUUA*UACCGCAGCUA
- Length
- 23 nucleotides
- Bulged bases
- 5VYC|1|i4|G|852
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i4|U|805
5VYC|1|i4|U|806
5VYC|1|i4|G|807
5VYC|1|i4|A|808
5VYC|1|i4|A|809
5VYC|1|i4|A|810
5VYC|1|i4|A|811
5VYC|1|i4|A|812
5VYC|1|i4|A|813
5VYC|1|i4|U|814
5VYC|1|i4|U|815
5VYC|1|i4|A|816
*
5VYC|1|i4|U|848
5VYC|1|i4|A|849
5VYC|1|i4|C|850
5VYC|1|i4|C|851
5VYC|1|i4|G|852
5VYC|1|i4|C|853
5VYC|1|i4|A|854
5VYC|1|i4|G|855
5VYC|1|i4|C|856
5VYC|1|i4|U|857
5VYC|1|i4|A|858
Current chains
- Chain i4
- Human 18S ribosomal RNA
Nearby chains
- Chain E4
- 40S ribosomal protein S4, X isoform
- Chain J4
- 40S ribosomal protein S9
- Chain L4
- 40S ribosomal protein S11
- Chain W4
- 40S ribosomal protein S15a
Coloring options: