IL_5VYC_461
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- AGGUUCGAAG*CGUAGUU
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i4|A|1042
5VYC|1|i4|G|1043
5VYC|1|i4|G|1044
5VYC|1|i4|U|1045
5VYC|1|i4|U|1046
5VYC|1|i4|C|1047
5VYC|1|i4|G|1048
5VYC|1|i4|A|1049
5VYC|1|i4|A|1050
5VYC|1|i4|G|1051
*
5VYC|1|i4|C|1067
5VYC|1|i4|G|1068
5VYC|1|i4|U|1069
5VYC|1|i4|A|1070
5VYC|1|i4|G|1071
5VYC|1|i4|U|1072
5VYC|1|i4|U|1073
Current chains
- Chain i4
- Human 18S ribosomal RNA
Nearby chains
- Chain O4
- 40S ribosomal protein S14
- Chain a4
- 40S ribosomal protein S26
- Chain k4
- Malignant T-cell-amplified sequence 1
- Chain l4
- Density-regulated protein
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