IL_5W4K_345
3D structure
- PDB id
- 5W4K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CGCUGAC*GGUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 5W4K|1|1A|G|977
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5W4K_345 not in the Motif Atlas
- Homologous match to IL_9DFE_024
- Geometric discrepancy: 0.053
- The information below is about IL_9DFE_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68243.1
- Basepair signature
- cWW-L-cWW-cWW-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
5W4K|1|1A|C|891
5W4K|1|1A|G|892
5W4K|1|1A|C|893
5W4K|1|1A|U|894
5W4K|1|1A|G|895
5W4K|1|1A|A|896
5W4K|1|1A|C|897
*
5W4K|1|1A|G|973
5W4K|1|1A|G|974
5W4K|1|1A|U|975
5W4K|1|1A|G|976
5W4K|1|1A|G|977
5W4K|1|1A|A|978
5W4K|1|1A|G|979
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L30
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