IL_5WDT_191
3D structure
- PDB id
- 5WDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGCAU*AUG(2MG)
- Length
- 10 nucleotides
- Bulged bases
- 5WDT|1|a|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WDT_191 not in the Motif Atlas
- Homologous match to IL_5J7L_362
- Geometric discrepancy: 0.2382
- The information below is about IL_5J7L_362
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49612.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5WDT|1|a|C|1051
5WDT|1|a|U|1052
5WDT|1|a|G|1053
5WDT|1|a|C|1054
5WDT|1|a|A|1055
5WDT|1|a|U|1056
*
5WDT|1|a|A|1204
5WDT|1|a|U|1205
5WDT|1|a|G|1206
5WDT|1|a|2MG|1207
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain x
- mRNA
- Chain y
- Transfer RNA; tRNA
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