IL_5WE4_057

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAGG*CUGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE4_057 not in the Motif Atlas

Geometric match to IL_4V9F_018

Geometric discrepancy: 0.2564

The information below is about IL_4V9F_018

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_97631.1

Basepair signature

cWW-L-R-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

5WE4|1|A|C|1526
5WE4|1|A|G|1527
5WE4|1|A|A|1528
5WE4|1|A|G|1529
5WE4|1|A|G|1530
*
5WE4|1|A|C|1541
5WE4|1|A|U|1542
5WE4|1|A|G|1543
5WE4|1|A|A|1544
5WE4|1|A|A|1545
5WE4|1|A|G|1546

Current chains

Chain A

23S rRNA

Nearby chains