IL_5WE4_184

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE4_184 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1038

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

5WE4|1|A|U|1851
5WE4|1|A|U|1852
5WE4|1|A|A|1853
5WE4|1|A|A|1854
5WE4|1|A|U|1855
5WE4|1|A|U|1856
5WE4|1|A|G|1857
5WE4|1|A|A|1858
5WE4|1|A|U|1859
5WE4|1|A|G|1860
*
5WE4|1|A|U|1882
5WE4|1|A|U|1883
5WE4|1|A|G|1884
5WE4|1|A|A|1885
5WE4|1|A|U|1886
5WE4|1|A|C|1887
5WE4|1|A|G|1888
5WE4|1|A|A|1889
5WE4|1|A|A|1890
5WE4|1|A|G|1891

Current chains

Chain A

23S rRNA

Nearby chains

Chain w

Transfer RNA; tRNA