IL_5WE6_181

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WE6_181 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1106

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

5WE6|1|A|U|1851
5WE6|1|A|U|1852
5WE6|1|A|A|1853
5WE6|1|A|A|1854
5WE6|1|A|U|1855
5WE6|1|A|U|1856
5WE6|1|A|G|1857
5WE6|1|A|A|1858
5WE6|1|A|U|1859
5WE6|1|A|G|1860
*
5WE6|1|A|U|1882
5WE6|1|A|U|1883
5WE6|1|A|G|1884
5WE6|1|A|A|1885
5WE6|1|A|U|1886
5WE6|1|A|C|1887
5WE6|1|A|G|1888
5WE6|1|A|A|1889
5WE6|1|A|A|1890
5WE6|1|A|G|1891

Current chains

Chain A

23S rRNA

Nearby chains

Chain w

Transfer RNA; tRNA