IL_5WF0_052

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

5WF0|1|A|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WF0_052 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1219

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5WF0|1|A|C|1437
5WF0|1|A|U|1438
5WF0|1|A|A|1439
5WF0|1|A|U|1440
*
5WF0|1|A|A|1551
5WF0|1|A|A|1552
5WF0|1|A|A|1553
5WF0|1|A|U|1554
5WF0|1|A|G|1555

Current chains

Chain A

23S rRNA

Nearby chains