IL_5WF0_178

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

5WF0|1|A|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WF0_178 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.3277

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

5WF0|1|A|U|1468
5WF0|1|A|A|1469
5WF0|1|A|A|1470
5WF0|1|A|G|1471
*
5WF0|1|A|U|1520
5WF0|1|A|G|1521
5WF0|1|A|A|1522
5WF0|1|A|U|1523
5WF0|1|A|G|1524

Current chains

Chain A

23S rRNA

Nearby chains