IL_5WFK_145

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGGG*CUU

Length

7 nucleotides

Bulged bases

5WFK|1|a|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WFK_145 not in the Motif Atlas

Geometric match to IL_6IA2_002

Geometric discrepancy: 0.1718

The information below is about IL_6IA2_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

5WFK|1|a|G|925
5WFK|1|a|G|926
5WFK|1|a|G|927
5WFK|1|a|G|928
*
5WFK|1|a|C|1389
5WFK|1|a|U|1390
5WFK|1|a|U|1391

Current chains

Chain a

16S rRNA

Nearby chains

Chain x

mRNA