IL_5WIS_082
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WIS_082 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.2642
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
5WIS|1|1A|G|2132
5WIS|1|1A|C|2133
5WIS|1|1A|G|2134
5WIS|1|1A|U|2135
5WIS|1|1A|A|2136
5WIS|1|1A|G|2137
5WIS|1|1A|G|2138
5WIS|1|1A|A|2139
5WIS|1|1A|U|2140
5WIS|1|1A|A|2141
5WIS|1|1A|G|2142
*
5WIS|1|1A|C|2200
5WIS|1|1A|C|2201
Current chains
- Chain 1A
- 23S ribosomal RNA
Nearby chains
- Chain 1y
- Transfer RNA; tRNA
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