IL_5WIS_100
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WIS_100 not in the Motif Atlas
- Geometric match to IL_7RQB_103
- Geometric discrepancy: 0.0558
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
5WIS|1|1A|C|2664
5WIS|1|1A|U|2665
5WIS|1|1A|A|2666
5WIS|1|1A|G|2667
5WIS|1|1A|U|2668
5WIS|1|1A|A|2669
5WIS|1|1A|C|2670
*
5WIS|1|1A|G|2675
5WIS|1|1A|G|2676
5WIS|1|1A|A|2677
5WIS|1|1A|C|2678
5WIS|1|1A|C|2679
5WIS|1|1A|G|2680
Current chains
- Chain 1A
- 23S ribosomal RNA
Nearby chains
- Chain 1H
- 50S ribosomal protein L6
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