IL_5WIS_329
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CAGC*GG
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WIS_329 not in the Motif Atlas
- Homologous match to IL_4LFB_049
- Geometric discrepancy: 0.1984
- The information below is about IL_4LFB_049
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.1
- Basepair signature
- cWW-cSH-cWS-cWW
- Number of instances in this motif group
- 7
Unit IDs
5WIS|1|2a|C|1129
5WIS|1|2a|A|1130
5WIS|1|2a|G|1131
5WIS|1|2a|C|1132
*
5WIS|1|2a|G|1142
5WIS|1|2a|G|1143
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2i
- 30S ribosomal protein S9
Coloring options: