IL_5WIS_359
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GUC*GAUAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WIS_359 not in the Motif Atlas
- Homologous match to IL_6CZR_361
- Geometric discrepancy: 0.2095
- The information below is about IL_6CZR_361
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56539.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
5WIS|1|2a|G|597
5WIS|1|2a|U|598
5WIS|1|2a|C|599
*
5WIS|1|2a|G|639
5WIS|1|2a|A|640
5WIS|1|2a|U|641
5WIS|1|2a|A|642
5WIS|1|2a|C|643
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2h
- 30S ribosomal protein S8
- Chain 2q
- 30S ribosomal protein S17
Coloring options: