IL_5WLC_015
3D structure
- PDB id
- 5WLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WLC_015 not in the Motif Atlas
- Geometric match to IL_5TBW_128
- Geometric discrepancy: 0.1486
- The information below is about IL_5TBW_128
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
5WLC|1|L0|G|346
5WLC|1|L0|U|347
5WLC|1|L0|U|348
5WLC|1|L0|G|349
*
5WLC|1|L0|C|375
5WLC|1|L0|U|376
5WLC|1|L0|U|377
5WLC|1|L0|C|378
Current chains
- Chain L0
- 5' ETS
Nearby chains
- Chain LW
- Utp7
- Chain NE
- Faf1
- Chain NK
- Krr1
- Chain SS
- Utp14
Coloring options: