IL_5WLC_020
3D structure
- PDB id
- 5WLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AACUC*GACU
- Length
- 9 nucleotides
- Bulged bases
- 5WLC|1|L0|C|469
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WLC_020 not in the Motif Atlas
- Geometric match to IL_1L9A_005
- Geometric discrepancy: 0.3401
- The information below is about IL_1L9A_005
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
5WLC|1|L0|A|467
5WLC|1|L0|A|468
5WLC|1|L0|C|469
5WLC|1|L0|U|470
5WLC|1|L0|C|471
*
5WLC|1|L2|G|47
5WLC|1|L2|A|48
5WLC|1|L2|C|49
5WLC|1|L2|U|50
Current chains
- Chain L0
- 5' ETS
- Chain L2
- U3 snoRNA
Nearby chains
- Chain LM
- Utp10
- Chain LW
- Utp7
- Chain SL
- Utp24
Coloring options: