IL_5WLC_035

3D structure

PDB id

5WLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUG*UGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WLC_035 not in the Motif Atlas

Homologous match to IL_4V88_400

Geometric discrepancy: 0.2108

The information below is about IL_4V88_400

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47298.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

5WLC|1|L1|C|270
5WLC|1|L1|A|271
5WLC|1|L1|U|272
5WLC|1|L1|G|273
*
5WLC|1|L1|U|283
5WLC|1|L1|G|284
5WLC|1|L1|G|285

Current chains

Chain L1

18S pre-rRNA

Nearby chains