IL_5WNR_049
3D structure
- PDB id
- 5WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CCAGCG*CGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WNR_049 not in the Motif Atlas
- Homologous match to IL_4LFB_066
- Geometric discrepancy: 0.2609
- The information below is about IL_4LFB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66997.1
- Basepair signature
- cWW-cWS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
5WNR|1|A|C|1128
5WNR|1|A|C|1129
5WNR|1|A|A|1130
5WNR|1|A|G|1131
5WNR|1|A|C|1132
5WNR|1|A|G|1133
*
5WNR|1|A|C|1141
5WNR|1|A|G|1142
5WNR|1|A|G|1143
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
Coloring options: