IL_5WNS_057
3D structure
- PDB id
- 5WNS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GU(5MC)ACG*CGAAGUC
- Length
- 13 nucleotides
- Bulged bases
- 5WNS|1|A|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WNS_057 not in the Motif Atlas
- Homologous match to IL_6CZR_369
- Geometric discrepancy: 0.5997
- The information below is about IL_6CZR_369
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71294.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
5WNS|1|A|G|1405
5WNS|1|A|U|1406
5WNS|1|A|5MC|1407
5WNS|1|A|A|1408
5WNS|1|A|C|1409
5WNS|1|A|G|1410
*
5WNS|1|A|C|1490
5WNS|1|A|G|1491
5WNS|1|A|A|1492
5WNS|1|A|A|1493
5WNS|1|A|G|1494
5WNS|1|A|U|1495
5WNS|1|A|C|1496
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
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