IL_5WNT_051
3D structure
- PDB id
- 5WNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 5WNT|1|A|U|1257, 5WNT|1|A|U|1278, 5WNT|1|A|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WNT_051 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.1029
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5WNT|1|A|G|1255
5WNT|1|A|A|1256
5WNT|1|A|U|1257
5WNT|1|A|G|1258
*
5WNT|1|A|C|1277
5WNT|1|A|U|1278
5WNT|1|A|A|1279
5WNT|1|A|A|1280
5WNT|1|A|U|1281
5WNT|1|A|C|1282
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN S3
- Chain J
- RIBOSOMAL PROTEIN S10
- Chain N
- RIBOSOMAL PROTEIN S14
Coloring options: