IL_5WYJ_024

3D structure

PDB id

5WYJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

8.7 Å

Loop

Sequence

GCGAU*GGAACC

Length

11 nucleotides

Bulged bases

5WYJ|1|5A|G|404

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WYJ|1|5A|G|402
5WYJ|1|5A|C|403
5WYJ|1|5A|G|404
5WYJ|1|5A|A|405
5WYJ|1|5A|U|406
*
5WYJ|1|5A|G|450
5WYJ|1|5A|G|451
5WYJ|1|5A|A|452
5WYJ|1|5A|A|453
5WYJ|1|5A|C|454
5WYJ|1|5A|C|455

Current chains

Chain 5A

5ETS RNA

Nearby chains

Chain SA

Small subunit ribosomal RNA; SSU rRNA

Chain UC

Unassigned helices