IL_5WYJ_055
3D structure
- PDB id
- 5WYJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.7 Å
Loop
- Sequence
- UGGUCAGC*GCGCA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WYJ|1|SA|U|560
5WYJ|1|SA|G|561
5WYJ|1|SA|G|562
5WYJ|1|SA|U|563
5WYJ|1|SA|C|566
5WYJ|1|SA|A|567
5WYJ|1|SA|G|568
5WYJ|1|SA|C|569
*
5WYJ|1|SA|G|574
5WYJ|1|SA|C|575
5WYJ|1|SA|G|576
5WYJ|1|SA|C|584
5WYJ|1|SA|A|585
Current chains
- Chain SA
- 18S ribosomal RNA
Nearby chains
- Chain B1
- Ribosome biogenesis protein BMS1
- Chain SY
- 40S ribosomal protein S23-A
- Chain Sf
- 40S ribosomal protein S30-A
- Chain U2
- Utp11
- Chain UC
- Unassigned helices
Coloring options: