IL_5WYJ_090

3D structure

PDB id

5WYJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

8.7 Å

Loop

Sequence

GUGAUC*GAUCUGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WYJ|1|5A|G|115
5WYJ|1|5A|U|116
5WYJ|1|5A|G|117
5WYJ|1|5A|A|118
5WYJ|1|5A|U|119
5WYJ|1|5A|C|120
*
5WYJ|1|5A|G|125
5WYJ|1|5A|A|126
5WYJ|1|5A|U|127
5WYJ|1|5A|C|128
5WYJ|1|5A|U|129
5WYJ|1|5A|G|130
5WYJ|1|5A|C|131

Current chains

Chain 5A

5ETS RNA

Nearby chains

Chain UB

Helical domain protein