IL_5WYK_013

3D structure

PDB id

5WYK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUGAUC*GAUCUGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WYK|1|5A|G|115
5WYK|1|5A|U|116
5WYK|1|5A|G|117
5WYK|1|5A|A|118
5WYK|1|5A|U|119
5WYK|1|5A|C|120
*
5WYK|1|5A|G|125
5WYK|1|5A|A|126
5WYK|1|5A|U|127
5WYK|1|5A|C|128
5WYK|1|5A|U|129
5WYK|1|5A|G|130
5WYK|1|5A|C|131

Current chains

Chain 5A

5ETS RNA

Nearby chains

Chain UB

Helical domain protein