IL_5WYK_064
3D structure
- PDB id
- 5WYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- ACCAC*GUCCCU
- Length
- 11 nucleotides
- Bulged bases
- 5WYK|1|SA|C|1158, 5WYK|1|SA|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WYK|1|SA|A|1157
5WYK|1|SA|C|1158
5WYK|1|SA|C|1159
5WYK|1|SA|A|1160
5WYK|1|SA|C|1161
*
5WYK|1|SA|G|1616
5WYK|1|SA|U|1617
5WYK|1|SA|C|1618
5WYK|1|SA|C|1619
5WYK|1|SA|C|1620
5WYK|1|SA|U|1621
Current chains
- Chain SA
- 18S ribosomal RNA
Nearby chains
- Chain BA
- Periodic tryptophan protein 2
- Chain BB
- U3 small nucleolar RNA-associated protein 12
- Chain MB
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain SG
- 40S ribosomal protein S5
- Chain Sd
- 40S ribosomal protein S28-A
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