IL_5WYK_090

3D structure

PDB id

5WYK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UAGCCG*UGUGA

Length

11 nucleotides

Bulged bases

5WYK|1|5A|G|354, 5WYK|1|5A|G|371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WYK|1|5A|U|352
5WYK|1|5A|A|353
5WYK|1|5A|G|354
5WYK|1|5A|C|355
5WYK|1|5A|C|356
5WYK|1|5A|G|357
*
5WYK|1|5A|U|368
5WYK|1|5A|G|369
5WYK|1|5A|U|370
5WYK|1|5A|G|371
5WYK|1|5A|A|372

Current chains

Chain 5A

5ETS RNA

Nearby chains

Chain K1

KRR1 small subunit processome component