IL_5Z3G_037
3D structure
- PDB id
- 5Z3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UG*CGCUCAAGCGUGUUA
- Length
- 17 nucleotides
- Bulged bases
- 5Z3G|1|A|C|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5Z3G|1|A|U|1173
5Z3G|1|A|G|1174
*
5Z3G|1|A|C|1312
5Z3G|1|A|G|1313
5Z3G|1|A|C|1314
5Z3G|1|A|U|1315
5Z3G|1|A|C|1316
5Z3G|1|A|A|1317
5Z3G|1|A|A|1318
5Z3G|1|A|G|1319
5Z3G|1|A|C|1320
5Z3G|1|A|G|1321
5Z3G|1|A|U|1322
5Z3G|1|A|G|1323
5Z3G|1|A|U|1324
5Z3G|1|A|U|1325
5Z3G|1|A|A|1326
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain J
- 60S ribosomal protein L7-A
- Chain S
- 60S ribosomal protein L16-A
- Chain W
- 60S ribosomal protein L20-A
- Chain j
- 60S ribosomal protein L33-A
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