IL_5Z3G_060

3D structure

PDB id

5Z3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUAU*AUUAAGC

Length

11 nucleotides

Bulged bases

5Z3G|1|A|G|3377

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5Z3G|1|A|G|3328
5Z3G|1|A|U|3329
5Z3G|1|A|A|3330
5Z3G|1|A|U|3331
*
5Z3G|1|A|A|3372
5Z3G|1|A|U|3373
5Z3G|1|A|U|3374
5Z3G|1|A|A|3375
5Z3G|1|A|A|3376
5Z3G|1|A|G|3377
5Z3G|1|A|C|3378

Current chains

Chain A

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L3