IL_5Z56_016
3D structure
- PDB id
- 5Z56 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- GUG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5Z56_016 not in the Motif Atlas
- Geometric match to IL_4P3T_001
- Geometric discrepancy: 0.117
- The information below is about IL_4P3T_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
5Z56|1|F|G|88
5Z56|1|F|U|89
5Z56|1|F|G|90
*
5Z56|1|H|C|8
5Z56|1|H|U|9
5Z56|1|H|C|10
Current chains
- Chain F
- U6 snRNA
- Chain H
- U2 snRNA
Nearby chains
- Chain J
- Crooked neck-like protein 1
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