IL_5ZEP_146
3D structure
- PDB id
- 5ZEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis hibernating state 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 5ZEP|1|a|A|552
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZEP_146 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.1073
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
5ZEP|1|a|C|549
5ZEP|1|a|G|550
5ZEP|1|a|U|551
5ZEP|1|a|A|552
5ZEP|1|a|A|553
5ZEP|1|a|A|554
5ZEP|1|a|G|555
*
5ZEP|1|a|C|862
5ZEP|1|a|G|863
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
- Chain u
- Conserved domain protein
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